LICENSE
MANIFEST.in
README.md
setup.py
benchmark/benchmark_traub_data.py
benchmark/benchmark_writer.py
benchmark/cprofile_writer.py
benchmark/plot_profile_data.py
benchmark/profile_info_chamcham.csv
benchmark/profile_info_chamcham.org
benchmark/profile_info_nargis.csv
benchmark/profile_info_nargis.org
benchmark/profilestats.py
benchmark/run_benchmark.sh
benchmark/run_cprofile.sh
doc/Makefile
doc/conf.py
doc/constants.rst
doc/index.rst
doc/make.bat
doc/model.rst
doc/modules.rst
doc/nsdf.rst
doc/nsdfdata.rst
doc/nsdfreader.rst
doc/nsdfwriter.rst
doc/requirements.txt
doc/util.rst
doc/_build/doctrees/constants.doctree
doc/_build/doctrees/environment.pickle
doc/_build/doctrees/index.doctree
doc/_build/doctrees/model.doctree
doc/_build/doctrees/modules.doctree
doc/_build/doctrees/nsdf.doctree
doc/_build/doctrees/nsdfdata.doctree
doc/_build/doctrees/nsdfreader.doctree
doc/_build/doctrees/nsdfwriter.doctree
doc/_build/doctrees/util.doctree
doc/_build/html/constants.html
doc/_build/html/genindex.html
doc/_build/html/index.html
doc/_build/html/model.html
doc/_build/html/modules.html
doc/_build/html/nsdf.html
doc/_build/html/nsdfdata.html
doc/_build/html/nsdfreader.html
doc/_build/html/nsdfwriter.html
doc/_build/html/objects.inv
doc/_build/html/py-modindex.html
doc/_build/html/search.html
doc/_build/html/searchindex.js
doc/_build/html/util.html
doc/_build/html/_modules/index.html
doc/_build/html/_modules/nsdf/constants.html
doc/_build/html/_modules/nsdf/model.html
doc/_build/html/_modules/nsdf/nsdfdata.html
doc/_build/html/_modules/nsdf/nsdfreader.html
doc/_build/html/_modules/nsdf/nsdfwriter.html
doc/_build/html/_modules/nsdf/util.html
doc/_build/html/_sources/constants.txt
doc/_build/html/_sources/index.txt
doc/_build/html/_sources/model.txt
doc/_build/html/_sources/modules.txt
doc/_build/html/_sources/nsdf.txt
doc/_build/html/_sources/nsdfdata.txt
doc/_build/html/_sources/nsdfreader.txt
doc/_build/html/_sources/nsdfwriter.txt
doc/_build/html/_sources/util.txt
doc/_build/html/_static/ajax-loader.gif
doc/_build/html/_static/basic.css
doc/_build/html/_static/comment-bright.png
doc/_build/html/_static/comment-close.png
doc/_build/html/_static/comment.png
doc/_build/html/_static/default.css
doc/_build/html/_static/doctools.js
doc/_build/html/_static/down-pressed.png
doc/_build/html/_static/down.png
doc/_build/html/_static/file.png
doc/_build/html/_static/jquery.js
doc/_build/html/_static/minus.png
doc/_build/html/_static/plus.png
doc/_build/html/_static/pygments.css
doc/_build/html/_static/searchtools.js
doc/_build/html/_static/sidebar.js
doc/_build/html/_static/underscore.js
doc/_build/html/_static/up-pressed.png
doc/_build/html/_static/up.png
doc/_build/html/_static/websupport.js
examples/README
examples/external_model.py
examples/hodgkin_huxley.py
examples/poolroom.py
examples/test_brian.py
examples/test_connections.py
examples/traub2005.py
examples/STEPS/diffusion_boundary.py
examples/STEPS/meshes/cyl_len10_diam1.txt
examples/STEPS/meshes/cyl_len10_diam1.xml
examples/datadump/README
examples/datadump/input.dat
examples/datadump/log2014042810:46:30.txt
examples/datadump/output.dat
examples/datadump/reformat.sh
examples/datadump/test_parse_datadump.py
examples/datadump/test_parse_datadump_spikes.py
examples/datadump/time.dat
examples/datadump/i/iout0.dat
examples/datadump/i/iout1.dat
examples/datadump/i/tmp/0.dat
examples/datadump/i/tmp/1.dat
examples/datadump/i/tmp/2.dat
examples/datadump/v/oout0.dat
examples/datadump/v/oout1.dat
examples/datadump/v/tmp/0.dat
examples/datadump/v/tmp/1.dat
examples/datadump/v/tmp/2.dat
examples/moose_Multi/ca1_asym.p
examples/moose_Multi/diffonly.g
examples/moose_Multi/mincell.p
examples/moose_Multi/mincell2.p
examples/moose_Multi/minchan.py
examples/moose_Multi/minimal.g
examples/moose_Multi/multi1.py
examples/moose_Multi/proto18.py
examples/moose_Multi/psd_merged30.g
examples/moose_Multi/psd_merged30b.g
examples/moose_Multi/psd_merged31d.g
examples/moose_Multi/x_compt.g
examples/moose_NeuroML/FvsI_Granule98.py
examples/moose_NeuroML/Granule98.py
examples/moose_NeuroML/Granule98_hsolve.py
examples/moose_NeuroML/GranuleCell.net.xml
examples/moose_NeuroML/README
examples/moose_NeuroML/granulecell_incremental_writing.py
examples/moose_NeuroML/granulecell_neuroml.py
examples/moose_NeuroML/cell_channels/GranPassiveCond.xml
examples/moose_NeuroML/cell_channels/Gran_CaHVA_98.xml
examples/moose_NeuroML/cell_channels/Gran_CaPool_98.xml
examples/moose_NeuroML/cell_channels/Gran_H_98.xml
examples/moose_NeuroML/cell_channels/Gran_KA_98.xml
examples/moose_NeuroML/cell_channels/Gran_KCa_98.xml
examples/moose_NeuroML/cell_channels/Gran_KDr_98.xml
examples/moose_NeuroML/cell_channels/Gran_NaF_98.xml
examples/moose_NeuroML/cell_channels/Granule_98.morph.xml
examples/neuron_Hay/Hay.hoc
examples/neuron_Hay/test_neuron_Hay.py
examples/neuron_Hay/mod_hay/CaDynamics_E2.mod
examples/neuron_Hay/mod_hay/Ca_HVA.mod
examples/neuron_Hay/mod_hay/Ca_LVAst.mod
examples/neuron_Hay/mod_hay/Ih.mod
examples/neuron_Hay/mod_hay/Im.mod
examples/neuron_Hay/mod_hay/K_Pst.mod
examples/neuron_Hay/mod_hay/K_Tst.mod
examples/neuron_Hay/mod_hay/NaTa_t.mod
examples/neuron_Hay/mod_hay/NaTs2_t.mod
examples/neuron_Hay/mod_hay/Nap_Et2.mod
examples/neuron_Hay/mod_hay/SK_E2.mod
examples/neuron_Hay/mod_hay/SKv3_1.mod
examples/neuron_Hay/mod_hay/epsp.mod
examples/neuron_Hay/morphology/L5PCbiophys3.hoc
examples/neuron_Hay/morphology/L5PCtemplate.hoc
examples/neuron_Hay/morphology/cell1.asc
examples/neuron_Hay/morphology/cell2.asc
figures/HH_figure.svg
figures/README
figures/appendix_fig.svg
figures/benchmark_horiz.svg
figures/benchmarks_vert.svg
figures/event_dialects.svg
figures/model_styles.svg
figures/two_cells_sketch.svg
figures/twocells.svg
graphviz/figure1.py
graphviz/figure1_popL5.py
graphviz/figure1_twocells.py
graphviz/HH_figure/figure_hh_a.py
graphviz/HH_figure/figure_hh_b.py
graphviz/event_dialects/data_ev_nan.py
graphviz/event_dialects/data_ev_oned.py
graphviz/event_dialects/data_ev_vlen.py
graphviz/event_dialects/map_ev_oned.py
graphviz/event_dialects/map_ev_vlen.py
graphviz/model_styles/map_simple.py
graphviz/model_styles/map_uid.py
graphviz/model_styles/map_xml.py
graphviz/model_styles/model_simple.py
graphviz/model_styles/model_uid.py
graphviz/model_styles/model_xml.py
graphviz/two_cells/figure_twocell_data.py
graphviz/two_cells/figure_twocell_map.py
nsdf/__init__.py
nsdf/constants.py
nsdf/model.py
nsdf/nsdfdata.py
nsdf/nsdfreader.py
nsdf/nsdfwriter.py
nsdf/util.py
nsdf.egg-info/PKG-INFO
nsdf.egg-info/SOURCES.txt
nsdf.egg-info/dependency_links.txt
nsdf.egg-info/requires.txt
nsdf.egg-info/top_level.txt
nsdf/test/print_stats.py
nsdf/test/profile_nan.py
nsdf/test/profile_write_dialects.py
nsdf/test/test_model.py
nsdf/test/test_nsdfdata.py
nsdf/test/test_nsdfreader.py
nsdf/test/test_nsdfwriter.py
nsdf/test/test_util.py
nsdf/test/util.py