Simulation classes. More...

Classes
class	DetectabilitySimulation
	Simulates peptide detectability. More...

class	DigestSimulation
	Simulates protein digestion. More...

class	IonizationSimulation
	Simulates Protein ionization. More...

class	MSSim
	Central class for simulation of mass spectrometry experiments. More...

struct	RawMSSignalSimulation::ContaminantInfo

class	RawMSSignalSimulation
	Simulates MS signals for a given set of peptides. More...

class	RawTandemMSSignalSimulation
	Simulates tandem MS signals for a given set of peptides. More...

class	RTSimulation
	Simulates/Predicts retention times for peptides or peptide separation. More...

class	SimRandomNumberGenerator
	Wrapper class for random number generators used by the simulation classes. More...

Enumerations
enum	IonizationType { MALDI, ESI }
	possible ionization methods More...

enum	IONIZATIONMETHOD { IM_ESI = 0, IM_MALDI = 1, IM_ALL = 2 }

enum	PROFILESHAPE { RT_RECTANGULAR, RT_GAUSSIAN }

enum	RESOLUTIONMODEL { RES_CONSTANT, RES_LINEAR, RES_SQRT }

Detailed Description

Simulation classes.

This module contains all classes involved in simulating different aspects of Mass Spectrometry Experiments.

Enumeration Type Documentation

enum IONIZATIONMETHOD

protected

enum IonizationType

possible ionization methods

Enumerator
MALDI
ESI

enum PROFILESHAPE

protected

Enumerator
RT_RECTANGULAR
RT_GAUSSIAN

enum RESOLUTIONMODEL

protected