net.sf.jabref.imports

Class MedlineFetcher

java.lang.Object

net.sf.jabref.imports.MedlineFetcher

All Implemented Interfaces:

ImportInspectionDialog.CallBack, EntryFetcher

public class MedlineFetcher
extends java.lang.Object
implements EntryFetcher

Fetch or search from Pubmed http://www.ncbi.nlm.nih.gov/sites/entrez/

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
protected class	MedlineFetcher.SearchResult

Field Summary

Fields

Modifier and Type	Field and Description
static int	PACING How many entries to query in one request

Constructor Summary

Constructors

Constructor and Description
MedlineFetcher()

Method Summary

Modifier and Type	Method and Description
java.lang.String	getHelpPage() Get the name of the help page for this activeFetcher.
java.net.URL	getIcon() Get the appropriate icon URL for this activeFetcher.
MedlineFetcher.SearchResult	getIds(java.lang.String term, int start, int pacing) Gets the initial list of ids
java.lang.String	getKeyName() Get the name of the key binding for this activeFetcher, if any.
javax.swing.JPanel	getOptionsPanel() If this activeFetcher requires additional options, a panel for setting up these should be returned in a JPanel by this method.
java.lang.String	getTitle() The title for this activeFetcher, displayed in the menu and in the side pane.
boolean	processQuery(java.lang.String query, ImportInspector dialog, OutputPrinter frame) Handle a query entered by the user.
void	stopFetching() This method is called by the dialog when the user has cancelled or signalled a stop.
java.lang.String	toSearchTerm(java.lang.String in)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PACING

public static final int PACING

How many entries to query in one request

See Also:

Constant Field Values

Constructor Detail

MedlineFetcher

public MedlineFetcher()

Method Detail

toSearchTerm

public java.lang.String toSearchTerm(java.lang.String in)

getIds

public MedlineFetcher.SearchResult getIds(java.lang.String term,
                                          int start,
                                          int pacing)

Gets the initial list of ids

stopFetching

public void stopFetching()

Description copied from interface: ImportInspectionDialog.CallBack

This method is called by the dialog when the user has cancelled or signalled a stop. It is expected that any long-running fetch operations will stop after this method is called.

Specified by:

stopFetching in interface ImportInspectionDialog.CallBack

getHelpPage

public java.lang.String getHelpPage()

Description copied from interface: EntryFetcher

Get the name of the help page for this activeFetcher. If given, a question mark is displayed in the side pane which leads to the help page.

Specified by:

getHelpPage in interface EntryFetcher

Returns:

The name of the help file or null if this activeFetcher does not have any help.

getIcon

public java.net.URL getIcon()

Description copied from interface: EntryFetcher

Get the appropriate icon URL for this activeFetcher.

Specified by:

getIcon in interface EntryFetcher

Returns:

The icon URL

getKeyName

public java.lang.String getKeyName()

Description copied from interface: EntryFetcher

Get the name of the key binding for this activeFetcher, if any.

Specified by:

getKeyName in interface EntryFetcher

Returns:

The name of the key binding or null, if no keybinding should be created.

getOptionsPanel

public javax.swing.JPanel getOptionsPanel()

Description copied from interface: EntryFetcher

If this activeFetcher requires additional options, a panel for setting up these should be returned in a JPanel by this method. This JPanel will be added to the side pane component automatically.

Specified by:

getOptionsPanel in interface EntryFetcher

Returns:

Options panel for this activeFetcher or null if this activeFetcher does not have any options.

getTitle

public java.lang.String getTitle()

Description copied from interface: EntryFetcher

The title for this activeFetcher, displayed in the menu and in the side pane.

Specified by:

getTitle in interface EntryFetcher

Returns:

The title

processQuery

public boolean processQuery(java.lang.String query,
                            ImportInspector dialog,
                            OutputPrinter frame)

Description copied from interface: EntryFetcher

Handle a query entered by the user. The method is expected to block the caller until all entries have been reported to the inspector.

Specified by:

processQuery in interface EntryFetcher

Parameters:

query - The query text.

dialog - The dialog to add imported entries to.

frame - An OutputPrinter passed to the activeFetcher for reporting about the status of the fetching.

Returns:

True if the query was completed successfully, false if an error occurred.