org.jmol.jvxl.readers
Class ObjReader

java.lang.Object
  org.jmol.jvxl.readers.SurfaceReader
      org.jmol.jvxl.readers.SurfaceFileReader
          org.jmol.jvxl.readers.PolygonFileReader
              org.jmol.jvxl.readers.ObjReader

All Implemented Interfaces:

VertexDataServer

 class ObjReader
extends PolygonFileReader

Field Summary

private int	nPolygons
(package private) java.lang.String	pmeshError
(package private) javax.vecmath.Point3f	pt

Fields inherited from class org.jmol.jvxl.readers.PolygonFileReader

nTriangles, nVertices

Fields inherited from class org.jmol.jvxl.readers.SurfaceFileReader

binarydoc, br, line, next

Fields inherited from class org.jmol.jvxl.readers.SurfaceReader

ANGSTROMS_PER_BOHR, cJvxlEdgeNaN, colorEncoder, colorFractionBase, colorFractionRange, contourVertexCount, defaultCutoff, defaultMappedDataMax, defaultMappedDataMin, edgeFractionBase, edgeFractionRange, fractionData, hasColorData, isApbsDx, isJvxl, isProgressive, isXLowToHigh, jvxlColorDataRead, jvxlCutoff, jvxlData, jvxlDataIs2dContour, jvxlDataIsColorMapped, jvxlDataIsPrecisionColor, jvxlEdgeDataRead, jvxlFileHeaderBuffer, jvxlNSurfaceInts, jvxlVoxelBitSet, marchingSquares, meshData, meshDataServer, nBytes, nDataPoints, nPointsX, nPointsY, nPointsZ, params, ptTemp, sg, vContours, vertexDataOnly, volumeData, volumetricOrigin, volumetricVectors, voxelCounts, voxelData

Constructor Summary

ObjReader(SurfaceGenerator sg, java.lang.String fileName, java.io.BufferedReader br)

Method Summary

(package private) void	getSurfaceData()
private boolean	readPmesh()
private boolean	readPolygons()
private boolean	readVertices()

Methods inherited from class org.jmol.jvxl.readers.PolygonFileReader

discardTempData, readSurfaceData, readVolumeData, readVolumeParameters

Methods inherited from class org.jmol.jvxl.readers.SurfaceFileReader

determineFileType, getTokens, parseFloat, parseFloat, parseInt, parseInt, parseIntNext, skipTo

Methods inherited from class org.jmol.jvxl.readers.SurfaceReader

addTriangleCheck, addVertexCopy, applyColorScale, colorIsosurface, createIsosurface, excludeMaximumSet, excludeMinimumSet, getArgbFromPalette, getColorIndexFromPalette, getColorPhaseIndex, getMaxMappedValue, getMinMappedValue, getSurfacePointAndFraction, getSurfacePointIndexAndFraction, getValue, gotoAndReadVoxelData, gotoData, initializeVolumetricData, jvxlUpdateInfo, readColorData, resetIsosurface, selectPocket, setVolumeData, updateSurfaceData, updateTriangles

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

nPolygons

private int nPolygons

pmeshError

java.lang.String pmeshError

pt

javax.vecmath.Point3f pt

Constructor Detail

ObjReader

ObjReader(SurfaceGenerator sg,
          java.lang.String fileName,
          java.io.BufferedReader br)

Method Detail

getSurfaceData

void getSurfaceData()
              throws java.lang.Exception

Specified by:

getSurfaceData in class PolygonFileReader

Throws:

java.lang.Exception

readPmesh

private boolean readPmesh()

readVertices

private boolean readVertices()
                      throws java.lang.Exception

Throws:

java.lang.Exception

readPolygons

private boolean readPolygons()